* Undergraduate students

  1. Carey MA.*, Ho ES.  A Transcriptome Study of Borrelia burgdorferi Infection in Murine Heart and Brain Tissues. Journal of Young Investigators 2017 June, Volume 33, Issue 1.
  2. Tsang AT, Dudgeon C, Yi L, Yu X, Goraczniak R, Donohue K, Kogan S, Brenneman MA, Ho ES, Gunderson SI, Carpizo DR. U1 Adaptors suppress the KRAS-MYC oncogenic axis in human pancreatic cancer xenografts. Mol Cancer Ther. 2017 Apr 4. PMID: 28377488.
  3. Ho ES, Newsom-Stewart CM*, Diarra L*, McCauley CS*.  gb4gv: a genome browser for geminivirus. PeerJ. 2017 Apr 12;5:e3165. doi: 10.7717/peerj.3165. PMC5391787. Access gb4gv from here.
  4. Kosarek N*, Ho ES. IDICAP: A Novel Tool for Integrating Drug Intervention Based on Cancer Panel. Liggett SB, ed. Journal of Personalized Medicine. 2016;6(4):19. doi:10.3390/jpm6040019. PMC5198058. Access IDICAP from here.
  5. Ho ES, Kuchie J*, Duffy S. Bioinformatic Analysis Reveals Genome Size Reduction And The Emergence Of Tyrosine Phosphorylation Site In The Movement Protein Of New World Bipartite Begomoviruses. PLoS ONE. November 10, 2014 DOI: 10.1371/journal.pone.0111957. Download bipartite_sequences from here.
  6. Goraczniak R, Wall BA, Behlke MA, Lennox KA, Ho ES, Zaphiros NH, Jakubowski C, Patel NR, Zhao S, Magaway C, Subbie SA, Jenny Yu L, Lacava S, Reuhl KR, Chen S, Gunderson SI. U1 Adaptor Oligonucleotides Targeting BCL2 and GRM1 Suppress Growth of Human Melanoma Xenografts In Vivo. Mol. Ther Nucleic Acids. 2013 May 14;2:e92. doi: 10.1038/mtna.2013.24. PubMed PMID: 23673539.
  7. Ho ES, Gunderson SI, Duffy S. A multispecies polyadenylation site model. BMC Bioinformatics. 2013;14 Suppl 2:S9. doi: 10.1186/1471-2105-14-S2-S9. Epub 2013 Jan 21. PubMed PMID: 23368518.
  8. Ho ES, Gunderson SI. Long conserved fragments upstream of Mammalian polyadenylation sites. Genome Biol Evol. 2011;3:654-66. doi:10.1093/gbe/evr053. Epub 2011 Jun 24. PubMed PMID: 21705472.
  9. Ho ES, Jakubowski CD, Gunderson SI. iTriplet, a rule-based nucleic acid sequence motif finder. Algorithms Mol Biol. 2009 Oct 29;4:14. doi:10.1186/1748-7188-4-14. PMCID: PMC2784457.
  10. Li Y, Ho ES, Gunderson SI, Kiledjian M. Mutational analysis of a Dcp2-binding element reveals general enhancement of decapping by 5′-end stem-loop structures. Nucleic Acids Res. 2009 Apr;37(7):2227-37. doi: 10.1093/nar/gkp087. Epub 2009 Feb 20. PubMed PMID: 19233875.
  11. Guan F, Caratozzolo RM, Goraczniak R, Ho ES, Gunderson SI. A bipartite U1 site represses U1A expression by synergizing with PIE to inhibit nuclear polyadenylation. RNA. 2007 Dec;13(12):2129-40. Epub 2007 Oct 17. PubMed PMID:17942741.